EnhancerDB
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  3. rs12401977[chr1:56042544]
Enhancers that have rs12401977[chr1:56042544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 56036104 56052895 enh26722
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs12401977[chr1:56042544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 56042535 56042545 NKX2-3 JASPAR yes 29051077
chr1 56042536 56042545 NKX2-8 JASPAR yes 29051078
chr1 56042544 56042557 EOMES JASPAR yes 29051079
Genes associated with rs12401977[chr1:56042544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More