EnhancerDB
  1. Home
  2. SNP
  3. rs12404855[chr1:40480545]
Enhancers that have rs12404855[chr1:40480545]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40476445 40483374 enh11772
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell)
Transcript factors that have rs12404855[chr1:40480545]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40480536 40480550 POU4F1 JASPAR yes 28309188
chr1 40480541 40480548 NKX3-1 JASPAR yes 28309189
chr1 40480545 40480556 FOXC1 JASPAR yes 28309190
Genes associated with rs12404855[chr1:40480545], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More