EnhancerDB
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  3. rs12406441[chr1:200276863]
Enhancers that have rs12406441[chr1:200276863]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs12406441[chr1:200276863]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200275084 200277005 ZNF274 GTRD no Liver (HepG2) 21362940
chr1 200275090 200276876 ZNF274 GTRD no Liver (HepG2) 21362941
chr1 200275279 200276901 ZNF274 GTRD no Liver (HepG2) 21362950
chr1 200276233 200276985 ZNF274 GTRD no Blood (GM12878) 21362967
chr1 200276249 200277064 ZNF143 GTRD no Epithelial (MCF-7) 21362968
chr1 200276334 200276947 ZNF274 GTRD no Blood (GM12878) 21362969
chr1 200276361 200277026 ZNF274 GTRD no Liver (HepG2) 21362970
chr1 200276385 200276974 ZNF274 GTRD no Blood (GM12878) 21362971
chr1 200276400 200276952 ZNF143 GTRD no Epithelial (MCF-7) 21362972
chr1 200276425 200276974 ZNF274 GTRD no Blood (GM12878) 21362973
chr1 200276427 200277004 ZNF143 GTRD no Epithelial (MCF-7) 21362974
chr1 200276434 200276901 ZNF274 GTRD no Liver (HepG2) 21362975
chr1 200276439 200276973 ZNF143 GTRD no Epithelial (MCF-7) 21362976
chr1 200276463 200276874 ZNF274 GTRD no Blood (GM12878) 21362977
chr1 200276483 200276942 ZNF274 GTRD no Blood (GM12878) 21362978
chr1 200276504 200277061 ZNF143 GTRD no Epithelial (MCF-7) 21362979
chr1 200276538 200276965 ZNF143 GTRD no Epithelial (MCF-7) 21362980
chr1 200276547 200276964 ZNF143 GTRD no Epithelial (MCF-7) 21362982
chr1 200276572 200276909 ZNF143 GTRD no Epithelial (MCF-7) 21362985
chr1 200276595 200276975 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362987
chr1 200276607 200277057 ZNF274 GTRD no Liver (HepG2) 21362989
chr1 200276616 200276976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362990
chr1 200276647 200276917 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362991
chr1 200276656 200276946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362992
chr1 200276660 200276930 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362993
chr1 200276690 200276880 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21362994
chr1 200276692 200276922 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362995
chr1 200276705 200276872 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362996
Genes associated with rs12406441[chr1:200276863], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More