EnhancerDB
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  3. rs12408621[chr1:207185534]
Enhancers that have rs12408621[chr1:207185534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207172085 207185955 enh12599
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs12408621[chr1:207185534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207185238 207185892 ZNF143 GTRD no Epithelial (MCF-7) 21373241
chr1 207185525 207185536 ELK4 JASPAR yes 34839981
chr1 207185525 207185536 FLI1 JASPAR yes 34839982
chr1 207185526 207185536 ELK1 JASPAR yes 34839983
chr1 207185526 207185536 ELK3 JASPAR yes 34839984
chr1 207185526 207185536 ERF JASPAR yes 34839985
chr1 207185526 207185536 ERG JASPAR yes 34839986
chr1 207185526 207185536 ETS1 JASPAR yes 34839987
chr1 207185526 207185536 ETV1 JASPAR yes 34839988
chr1 207185526 207185536 ETV3 JASPAR yes 34839989
chr1 207185526 207185536 ETV4 JASPAR yes 34839990
chr1 207185526 207185536 ETV5 JASPAR yes 34839991
chr1 207185526 207185536 ETV6 JASPAR yes 34839992
chr1 207185526 207185536 FEV JASPAR yes 34839993
chr1 207185526 207185536 FLI1 JASPAR yes 34839994
chr1 207185526 207185536 GABPA JASPAR yes 34839995
chr1 207185526 207185537 ETV2 JASPAR yes 34839996
chr1 207185528 207185534 ETS1 JASPAR yes 34839997
chr1 207185528 207185534 SPI1 JASPAR yes 34839998
Genes associated with rs12408621[chr1:207185534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More