EnhancerDB
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  3. rs12408682[chr1:200300804]
Enhancers that have rs12408682[chr1:200300804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12408682[chr1:200300804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200300799 200300804 TFAP2A TRANSFAC yes 34435304
chr1 200300799 200300805 MZF1 JASPAR yes 34435305
chr1 200300804 200300819 FOXA1 JASPAR yes 34435306
Genes associated with rs12408682[chr1:200300804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More