EnhancerDB
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  3. rs12409162[chr1:56096183]
Enhancers that have rs12409162[chr1:56096183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 56095225 56109155 enh26723
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Kidney
Transcript factors that have rs12409162[chr1:56096183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 56095134 56097045 TEF1 GTRD no Bone (Osteoblast) 21325392
chr1 56096180 56096190 HOXA13 JASPAR yes 29056221
Genes associated with rs12409162[chr1:56096183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More