EnhancerDB
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  3. rs12418591[chr11:66853030]
Enhancers that have rs12418591[chr11:66853030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 66841490 66853575 enh14015
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs12418591[chr11:66853030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 66848276 66863173 ZNF143 GTRD no Epithelial (MCF-7) 21497058
chr11 66848276 66863173 ZNF143 GTRD no Epithelial (MCF-7) 107983606
chr11 66848867 66853124 ZNF143 GTRD no Epithelial (MCF-7) 21497067
chr11 66848867 66853124 ZNF143 GTRD no Epithelial (MCF-7) 107983615
chr11 66849803 66853450 TCF7L2 GTRD no Colon (HCT116) 21497124
chr11 66851038 66853233 ZNF274 GTRD no Blood (GM12878) 21497133
chr11 66851656 66858491 ZNF143 GTRD no Epithelial (MCF-7) 21497149
chr11 66851657 66855027 ZNF143 GTRD no Epithelial (MCF-7) 21497150
chr11 66851844 66853122 ZNF143 GTRD no Epithelial (MCF-7) 21497161
chr11 66852092 66855249 TCF7L2 GTRD no Colon (HCT116) 21497167
chr11 66852163 66853095 ZNF143 GTRD no Epithelial (MCF-7) 21497171
chr11 66852166 66858516 ZNF143 GTRD no Epithelial (MCF-7) 21497172
chr11 66852176 66853327 TCF7L2 GTRD no Colon (HCT116) 21497173
chr11 66852226 66853604 TCF7L2 GTRD no Colon (HCT116) 21497174
chr11 66852433 66853240 TCF7L2 GTRD no Colon (HCT116) 21497176
chr11 66852580 66857286 ZNF143 GTRD no Epithelial (MCF-7) 21497177
chr11 66853025 66853037 HES7 JASPAR yes 39400652
chr11 66853026 66853036 BHLHE41 JASPAR yes 39400653
chr11 66853026 66853036 HEY2 JASPAR yes 39400654
Genes associated with rs12418591[chr11:66853030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 67159176 67165881 + RAD9A ENSG00000172613.3 67159176 306146 Spleen 0.0411893 11145