EnhancerDB
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Enhancers that have rs12426854[chr12:51783805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 51775445 51784425 enh14719
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12426854[chr12:51783805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51783010 51784032 POLR2A UCSC Txn Factor no Conserved 108031847
chr12 51783204 51783854 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545659
chr12 51783204 51783854 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108031851
chr12 51783576 51783816 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545666
chr12 51783576 51783816 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031858
chr12 51783649 51783853 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21545668
chr12 51783649 51783853 SPI1 UCSC Txn Factor no Conserved 108031860
chr12 51783649 51783853 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108031861
chr12 51783668 51783814 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545669
chr12 51783668 51783814 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031862
chr12 51783804 51783819 PRDM1 JASPAR yes 120886920
Genes associated with rs12426854[chr12:51783805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More