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- rs12444435[chr16:88956409]
Enhancers that have rs12444435[chr16:88956409]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
88946220 |
88957735 |
enh44357 |
|
|
Transcript factors that have rs12444435[chr16:88956409]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
88955590
|
88957658
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224205
|
|
|
chr16
|
88955726
|
88957877
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108224207
|
|
|
chr16
|
88955773
|
88957786
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224208
|
|
|
chr16
|
88955825
|
88956583
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224209
|
|
|
chr16
|
88955860
|
88956811
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108224210
|
|
|
chr16
|
88955895
|
88956776
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224211
|
|
|
chr16
|
88955917
|
88958296
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108224212
|
|
|
chr16
|
88956394
|
88956413
|
CTCF
|
JASPAR
|
yes
|
|
12306673
|
|
Genes associated with rs12444435[chr16:88956409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
89006197
|
89017932
|
+
|
RP11-830F9.6
|
ENSG00000205018.2
|
89006197
|
49788
|
Spleen
|
0.0608559
|
15170
|
|