EnhancerDB
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  3. rs12454115[chr18:57580552]
Enhancers that have rs12454115[chr18:57580552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57569615 57596800 enh4881
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs12454115[chr18:57580552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57580213 57581047 ZNF274 GTRD no Cervix (HeLa-S3) 21824901
chr18 57580325 57581067 TCF7L2 GTRD no Colon (HCT116) 21824902
chr18 57580385 57580945 ZNF274 GTRD no Bone Marrow (K562) 21824903
chr18 57580398 57580724 ZNF274 GTRD no Bone Marrow (K562) 21824904
chr18 57580436 57580728 ZNF274 GTRD no Cervix (HeLa-S3) 21824905
chr18 57580519 57581086 TCF7L2 GTRD no Colon (HCT116) 21824906
chr18 57580532 57580553 ZNF263 JASPAR yes 111063825
chr18 57580536 57580557 IRF1 JASPAR yes 111063826
chr18 57580540 57580555 PRDM1 JASPAR yes 111063827
chr18 57580542 57580563 IRF1 JASPAR yes 111063828
chr18 57580545 57580559 IRF7 JASPAR yes 111063829
chr18 57580549 57580560 FOXA1 JASPAR yes 111063830
chr18 57580549 57580564 FOXA1 JASPAR yes 111063831
Genes associated with rs12454115[chr18:57580552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More