EnhancerDB
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  3. rs12460002[chr19:5990557]
Enhancers that have rs12460002[chr19:5990557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5983365 5992702 enh32880
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Stomach
Transcript factors that have rs12460002[chr19:5990557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5989448 5990864 ZNF274 GTRD no Bone Marrow (K562) 21844028
chr19 5989448 5990864 ZNF274 GTRD no Bone Marrow (K562) 108376334
chr19 5989591 5990975 ZNF274 GTRD no Bone Marrow (K562) 21844029
chr19 5989591 5990975 ZNF274 GTRD no Bone Marrow (K562) 108376335
chr19 5989819 5990743 ZNF274 GTRD no Bone Marrow (K562) 21844030
chr19 5989819 5990743 ZNF274 GTRD no Bone Marrow (K562) 108376336
chr19 5989826 5990654 ZNF274 GTRD no Bone Marrow (K562) 21844031
chr19 5989826 5990654 ZNF274 GTRD no Bone Marrow (K562) 108376337
chr19 5989958 5990867 ZNF274 GTRD no Bone Marrow (K562) 21844032
chr19 5990019 5990842 ZNF274 GTRD no Bone Marrow (K562) 21844034
chr19 5990122 5990638 ZNF274 GTRD no Bone Marrow (K562) 21844035
chr19 5990172 5990869 ZNF274 GTRD no Bone Marrow (K562) 21844036
chr19 5990178 5990754 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21844037
chr19 5990198 5990724 ZNF274 GTRD no Bone Marrow (K562) 21844038
chr19 5990204 5990846 ZNF274 GTRD no Bone Marrow (K562) 21844039
chr19 5990212 5990700 ZNF274 GTRD no Bone Marrow (K562) 21844041
chr19 5990253 5990686 ZNF274 GTRD no Bone Marrow (K562) 21844042
chr19 5990256 5990589 ZBTB33 GTRD no Brain (SK-N-SH) 21844043
chr19 5990276 5990678 ZBTB33 GTRD no Brain (SK-N-SH) 21844044
chr19 5990278 5990599 ZNF274 GTRD no Bone Marrow (K562) 21844045
chr19 5990292 5990637 ZNF274 GTRD no Bone Marrow (K562) 21844046
chr19 5990299 5990675 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21844047
chr19 5990303 5990673 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21844048
chr19 5990305 5990669 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21844049
chr19 5990335 5990774 ZNF274 GTRD no Bone Marrow (K562) 21844051
chr19 5990337 5990791 ZNF274 GTRD no Bone Marrow (K562) 21844052
chr19 5990360 5990675 ZNF274 GTRD no Bone Marrow (K562) 21844053
chr19 5990367 5990757 ZNF274 GTRD no Bone Marrow (K562) 21844054
chr19 5990375 5990569 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21844055
chr19 5990385 5990609 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21844056
chr19 5990387 5990591 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21844057
chr19 5990536 5990557 ZNF263 JASPAR yes 112250897
chr19 5990551 5990561 SP1 JASPAR yes 112250898
chr19 5990552 5990560 SP1 TRANSFAC yes 112250899
chr19 5990552 5990561 SP1 TRANSFAC yes 112250900
chr19 5990553 5990558 SP1 TRANSFAC yes 112250901
chr19 5990554 5990559 SP1 TRANSFAC yes 112250902
chr19 5990554 5990560 SP1 TRANSFAC yes 112250903
chr19 5990556 5990566 SP1 JASPAR yes 112250904
chr19 5990557 5990565 SP1 TRANSFAC yes 112250905
chr19 5990557 5990566 SP1 TRANSFAC yes 112250906
Genes associated with rs12460002[chr19:5990557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More