EnhancerDB
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  3. rs12460232[chr19:14659053]
Enhancers that have rs12460232[chr19:14659053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14658964 14673635 enh5022
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12460232[chr19:14659053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14659037 14659056 PITX2 TRANSFAC yes 112577706
chr19 14659043 14659056 ZBTB18 JASPAR yes 112577707
chr19 14659044 14659056 PKNOX1 JASPAR yes 112577708
chr19 14659044 14659056 TGIF1 JASPAR yes 112577709
chr19 14659045 14659054 SNAI2 JASPAR yes 112577710
chr19 14659045 14659055 FIGLA JASPAR yes 112577711
chr19 14659045 14659055 ID4 JASPAR yes 112577712
chr19 14659045 14659055 TCF3 JASPAR yes 112577713
chr19 14659045 14659055 TCF4 JASPAR yes 112577714
chr19 14659047 14659056 ZEB1 JASPAR yes 112577715
chr19 14659047 14659057 TBX21 JASPAR yes 112577716
chr19 14659048 14659056 MGA JASPAR yes 112577717
chr19 14659048 14659056 TBX15 JASPAR yes 112577718
chr19 14659048 14659056 TBX1 JASPAR yes 112577719
chr19 14659048 14659056 TBX4 JASPAR yes 112577720
chr19 14659048 14659056 TBX5 JASPAR yes 112577721
chr19 14659048 14659058 TBR1 JASPAR yes 112577722
chr19 14659048 14659061 SMAD2 JASPAR yes 112577723
Genes associated with rs12460232[chr19:14659053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More