EnhancerDB
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  3. rs12460236[chr19:14659080]
Enhancers that have rs12460236[chr19:14659080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14658964 14673635 enh5022
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12460236[chr19:14659080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14659077 14659081 LFA1 TRANSFAC yes 112577725
chr19 14659080 14659084 YY1 TRANSFAC yes 112577726
Genes associated with rs12460236[chr19:14659080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More