EnhancerDB
  1. Home
  2. SNP
  3. rs12466888[chr2:225873550]
Enhancers that have rs12466888[chr2:225873550]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225864797 225884855 enh34336
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Esophagus Astrocyte Lung (A549) Blood (GM12878) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Spleen Blood (T-cell)
Transcript factors that have rs12466888[chr2:225873550]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225873542 225873555 SCRT2 JASPAR yes 81366121
chr2 225873542 225873557 SCRT1 JASPAR yes 81366122
Genes associated with rs12466888[chr2:225873550], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More