EnhancerDB
  1. Home
  2. SNP
  3. rs12562372[chr1:117031337]
Enhancers that have rs12562372[chr1:117031337]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12562372[chr1:117031337]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117031318 117031338 RREB1 JASPAR yes 31812719
chr1 117031320 117031340 RREB1 JASPAR yes 31812720
chr1 117031321 117031341 RREB1 JASPAR yes 31812721
chr1 117031323 117031343 RREB1 JASPAR yes 31812724
chr1 117031324 117031344 RREB1 JASPAR yes 31812725
chr1 117031325 117031346 ZNF263 JASPAR yes 31812727
chr1 117031326 117031346 RREB1 JASPAR yes 31812728
chr1 117031329 117031339 ZNF740 JASPAR yes 31812730
Genes associated with rs12562372[chr1:117031337], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More