EnhancerDB
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  3. rs12598261[chr16:84540699]
Enhancers that have rs12598261[chr16:84540699]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 84535225 84555767 enh4168
Cervix (HeLa-S3) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Thymus Stomach
Transcript factors that have rs12598261[chr16:84540699]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 84540689 84540704 TFAP2A JASPAR yes 11975076
chr16 84540689 84540704 TFAP2C JASPAR yes 11975077
chr16 84540691 84540703 TFAP2A JASPAR yes 11975079
chr16 84540691 84540704 TFAP2A JASPAR yes 11975080
chr16 84540691 84540704 TFAP2B JASPAR yes 11975081
chr16 84540691 84540704 TFAP2C JASPAR yes 11975082
chr16 84540691 84540706 TFAP2A JASPAR yes 11975083
chr16 84540692 84540701 TFAP2A JASPAR yes 11975084
chr16 84540692 84540704 TFAP2A JASPAR yes 11975085
chr16 84540692 84540704 TFAP2B JASPAR yes 11975086
chr16 84540692 84540704 TFAP2C JASPAR yes 11975087
chr16 84540694 84540703 TFAP2A JASPAR yes 11975088
chr16 84540699 84540703 LFA1 TRANSFAC yes 11975089
Genes associated with rs12598261[chr16:84540699], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More