EnhancerDB
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  3. rs12598939[chr16:10713477]
Enhancers that have rs12598939[chr16:10713477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 10701175 10720664 enh16528
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
chr16 10713350 10713596 vista21802
VISTA
Transcript factors that have rs12598939[chr16:10713477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 10713150 10713646 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108178759
chr16 10713237 10713607 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21688858
chr16 10713237 10713607 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108178760
chr16 10713246 10713710 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21688859
chr16 10713246 10713710 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108178761
chr16 10713276 10713646 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108178763
chr16 10713292 10713602 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21688861
chr16 10713292 10713602 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108178764
chr16 10713310 10713800 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108178765
chr16 10713350 10713806 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21688862
chr16 10713350 10713806 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108178766
chr16 10713352 10713672 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108178767
chr16 10713374 10713638 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21688863
chr16 10713374 10713638 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108178768
chr16 10713378 10713754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21688864
chr16 10713378 10713754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108178769
chr16 10713384 10713634 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108178770
chr16 10713384 10713714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108178771
chr16 10713406 10713596 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21688865
chr16 10713406 10713596 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108178772
chr16 10713442 10713597 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108178773
chr16 10713442 10713918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21688866
chr16 10713442 10713918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108178774
chr16 10713469 10713477 MGA JASPAR yes 9456250
chr16 10713469 10713477 TBX15 JASPAR yes 9456251
chr16 10713469 10713477 TBX1 JASPAR yes 9456252
chr16 10713469 10713477 TBX4 JASPAR yes 9456253
chr16 10713469 10713477 TBX5 JASPAR yes 9456254
chr16 10713469 10713477 MGA JASPAR yes 49338416
chr16 10713469 10713477 TBX15 JASPAR yes 49338417
chr16 10713469 10713477 TBX1 JASPAR yes 49338418
chr16 10713469 10713477 TBX4 JASPAR yes 49338419
chr16 10713469 10713477 TBX5 JASPAR yes 49338420
chr16 10713469 10713483 PLAG1 JASPAR yes 9456255
chr16 10713469 10713483 PLAG1 JASPAR yes 49338421
Genes associated with rs12598939[chr16:10713477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More