EnhancerDB
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  3. rs12610520[chr19:10349118]
Enhancers that have rs12610520[chr19:10349118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs12610520[chr19:10349118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10349020 10349420 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848568
chr19 10349057 10349393 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848569
chr19 10349057 10349497 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848570
chr19 10349063 10349399 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848571
chr19 10349077 10349407 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848572
chr19 10349080 10349380 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848573
chr19 10349092 10349312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848574
chr19 10349099 10349535 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848575
chr19 10349104 10349444 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848576
chr19 10349105 10349355 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848577
chr19 10349114 10349119 SP1 TRANSFAC yes 112415809
chr19 10349114 10349374 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21848578
Genes associated with rs12610520[chr19:10349118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More