EnhancerDB
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  3. rs12618472[chr2:238653379]
Enhancers that have rs12618472[chr2:238653379]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238648865 238656355 enh34437
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12618472[chr2:238653379]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238653372 238653390 RARA JASPAR yes 82139632
chr2 238653374 238653382 ATF2 TRANSFAC yes 82139633
chr2 238653374 238653388 MTF1 JASPAR yes 82139634
chr2 238653375 238653380 ATF1 TRANSFAC yes 82139635
chr2 238653375 238653395 ESR1 JASPAR yes 82139636
chr2 238653379 238653397 ESR2 JASPAR yes 82139637
Genes associated with rs12618472[chr2:238653379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More