EnhancerDB
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  3. rs12623001[chr2:121209906]
Enhancers that have rs12623001[chr2:121209906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121189574 121215443 enh5810
Bone Marrow (K562) Large Intestine Astrocyte Bone (Osteoblast) Lung (A549) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12623001[chr2:121209906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121209896 121209913 RARA JASPAR yes 76538874
chr2 121209896 121209913 RXRA JASPAR yes 76538875
chr2 121209901 121209907 SP1 TRANSFAC yes 76538877
chr2 121209902 121209907 SP1 TRANSFAC yes 76538878
chr2 121209903 121209908 SP1 TRANSFAC yes 76538879
Genes associated with rs12623001[chr2:121209906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More