EnhancerDB
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  3. rs12734709[chr1:200260632]
Enhancers that have rs12734709[chr1:200260632]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs12734709[chr1:200260632]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200260353 200261130 ZNF274 GTRD no Liver (HepG2) 21362791
chr1 200260386 200261380 ZNF143 GTRD no Epithelial (MCF-7) 21362792
chr1 200260406 200261440 ZNF143 GTRD no Epithelial (MCF-7) 21362793
chr1 200260419 200261159 ZNF274 GTRD no Liver (HepG2) 21362794
chr1 200260419 200261316 ZNF143 GTRD no Epithelial (MCF-7) 21362795
chr1 200260439 200261202 ZNF143 GTRD no Epithelial (MCF-7) 21362796
chr1 200260449 200261013 ZNF274 GTRD no Liver (HepG2) 21362797
chr1 200260468 200261410 ZNF274 GTRD no Liver (HepG2) 21362798
chr1 200260486 200261435 ZNF274 GTRD no Liver (HepG2) 21362799
chr1 200260509 200261428 ZNF274 GTRD no Liver (HepG2) 21362800
chr1 200260514 200261120 ZNF274 GTRD no Liver (HepG2) 21362801
chr1 200260516 200261198 ZNF143 GTRD no Epithelial (MCF-7) 21362802
chr1 200260523 200261038 ZNF274 GTRD no Liver (HepG2) 21362803
chr1 200260542 200261121 ZNF274 GTRD no Liver (HepG2) 21362804
chr1 200260549 200261199 ZNF143 GTRD no Epithelial (MCF-7) 21362805
chr1 200260556 200261350 ZNF274 GTRD no Liver (HepG2) 21362806
chr1 200260563 200261117 ZNF274 GTRD no Liver (HepG2) 21362807
chr1 200260598 200261516 ZNF274 GTRD no Liver (HepG2) 21362808
chr1 200260610 200261081 ZNF274 GTRD no Liver (HepG2) 21362809
chr1 200260627 200260638 SPDEF JASPAR yes 34430030
chr1 200260631 200260917 ZNF274 GTRD no Blood (GM12878) 21362810
Genes associated with rs12734709[chr1:200260632], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More