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- rs12740374[chr1:109817590]
Enhancers that have rs12740374[chr1:109817590]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
109814665 |
109820035 |
enh109342 |
|
|
| chr1 |
109816874 |
109818905 |
vista98 |
|
|
Transcript factors that have rs12740374[chr1:109817590]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
109814936
|
109818898
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107686530
|
|
|
chr1
|
109817579
|
109817591
|
TFAP2A
|
JASPAR
|
yes
|
|
31419647
|
|
|
chr1
|
109817579
|
109817591
|
TFAP2B
|
JASPAR
|
yes
|
|
31419648
|
|
|
chr1
|
109817579
|
109817591
|
TFAP2C
|
JASPAR
|
yes
|
|
31419649
|
|
|
chr1
|
109817579
|
109817591
|
TFAP2A
|
JASPAR
|
yes
|
|
71145827
|
|
|
chr1
|
109817579
|
109817591
|
TFAP2B
|
JASPAR
|
yes
|
|
71145828
|
|
|
chr1
|
109817579
|
109817591
|
TFAP2C
|
JASPAR
|
yes
|
|
71145829
|
|
|
chr1
|
109817579
|
109817594
|
TFAP2A
|
JASPAR
|
yes
|
|
31419650
|
|
|
chr1
|
109817579
|
109817594
|
TFAP2C
|
JASPAR
|
yes
|
|
31419651
|
|
|
chr1
|
109817579
|
109817594
|
TFAP2A
|
JASPAR
|
yes
|
|
71145830
|
|
|
chr1
|
109817579
|
109817594
|
TFAP2C
|
JASPAR
|
yes
|
|
71145831
|
|
|
chr1
|
109817590
|
109817602
|
PBX1
|
JASPAR
|
yes
|
|
31419652
|
|
|
chr1
|
109817590
|
109817602
|
PBX1
|
JASPAR
|
yes
|
|
71145832
|
|
Genes associated with rs12740374[chr1:109817590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
109792641
|
109818372
|
+
|
CELSR2
|
ENSG00000143126.7
|
109792641
|
0
|
Pancreas
|
0.000235563
|
972
|
|
|
chr1
|
109941653
|
109969062
|
-
|
PSMA5
|
ENSG00000143106.8
|
109969062
|
124063
|
Liver
|
0.122473
|
976
|
|