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- rs12740417[chr1:183553560]
Enhancers that have rs12740417[chr1:183553560]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
183543820 |
183555571 |
enh12455 |
|
|
Transcript factors that have rs12740417[chr1:183553560]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
183552333
|
183557977
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107850876
|
|
|
chr1
|
183552333
|
183557977
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107850877
|
|
|
chr1
|
183552763
|
183554047
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107850880
|
|
|
chr1
|
183552864
|
183553845
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107850881
|
|
|
chr1
|
183553547
|
183553561
|
GATA2
|
JASPAR
|
yes
|
|
33689488
|
|
Genes associated with rs12740417[chr1:183553560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
183441351
|
183567381
|
+
|
SMG7
|
ENSG00000116698.16
|
183441351
|
0
|
Breast
|
0.408646
|
1640
|
|