EnhancerDB
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  3. rs12742541[chr1:42098082]
Enhancers that have rs12742541[chr1:42098082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs12742541[chr1:42098082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42098069 42098090 ZNF263 JASPAR yes 28403587
chr1 42098071 42098092 IRF1 JASPAR yes 28403588
chr1 42098075 42098089 STAT1 JASPAR yes 28403589
chr1 42098075 42098090 PRDM1 JASPAR yes 28403590
chr1 42098075 42098090 STAT2 JASPAR yes 28403591
Genes associated with rs12742541[chr1:42098082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More