EnhancerDB
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  3. rs12749109[chr1:42102617]
Enhancers that have rs12749109[chr1:42102617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs12749109[chr1:42102617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42102606 42102627 IRF1 JASPAR yes 28404342
chr1 42102608 42102623 IRF9 JASPAR yes 28404343
Genes associated with rs12749109[chr1:42102617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More