-
Home
- SNP
- rs12775266[chr10:27608838]
Enhancers that have rs12775266[chr10:27608838]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr10 |
27606905 |
27611175 |
enh50361 |
|
|
Transcript factors that have rs12775266[chr10:27608838]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr10
|
27608709
|
27609259
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107905195
|
|
|
chr10
|
27608716
|
27609032
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
107905196
|
|
|
chr10
|
27608738
|
27609002
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107905197
|
|
|
chr10
|
27608738
|
27609394
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
107905198
|
|
|
chr10
|
27608752
|
27609060
|
STAT1
|
UCSC Txn Factor
|
no
|
Conserved
|
107905199
|
|
|
chr10
|
27608752
|
27609060
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107905200
|
|
|
chr10
|
27608827
|
27608839
|
HINFP
|
JASPAR
|
yes
|
|
126178936
|
|
|
chr10
|
27608828
|
27608847
|
PAX5
|
JASPAR
|
yes
|
|
126178937
|
|
|
chr10
|
27608831
|
27608848
|
PAX1
|
JASPAR
|
yes
|
|
126178939
|
|
|
chr10
|
27608835
|
27609179
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107905201
|
|
Genes associated with rs12775266[chr10:27608838], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |