EnhancerDB
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  3. rs1279739[chr5:180670172]
Enhancers that have rs1279739[chr5:180670172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 180669825 180673975 enh100454
Uterus
Transcript factors that have rs1279739[chr5:180670172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 180670162 180670176 SPI1 JASPAR yes 68241411
chr5 180670162 180670176 SPIC JASPAR yes 68241412
chr5 180670163 180670176 ELF1 JASPAR yes 68241413
chr5 180670164 180670176 EHF JASPAR yes 68241414
chr5 180670164 180670176 ELF1 JASPAR yes 68241415
chr5 180670164 180670176 ELF4 JASPAR yes 68241416
chr5 180670165 180670176 ELF5 JASPAR yes 68241417
chr5 180670165 180670176 ETV2 JASPAR yes 68241418
chr5 180670166 180670176 ETS1 JASPAR yes 68241419
chr5 180670166 180670176 ETV1 JASPAR yes 68241420
chr5 180670166 180670176 ETV4 JASPAR yes 68241421
chr5 180670166 180670176 ETV5 JASPAR yes 68241422
chr5 180670166 180670176 ETV6 JASPAR yes 68241423
chr5 180670166 180670177 ELK4 JASPAR yes 68241424
chr5 180670168 180670174 ETS1 JASPAR yes 68241425
chr5 180670168 180670174 SPI1 JASPAR yes 68241426
Genes associated with rs1279739[chr5:180670172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0 Heart 0.000191915 6090
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0 Pancreas 0.00642201 6090
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0 Breast 0.00103107 6090
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0 Spleen 0.0204747 6090
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0 Thyroid 1.21793e-08 6090
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0 Lung 0.0118313 6090
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0 Adrenal 0.00206589 6090