EnhancerDB
  1. Home
  2. SNP
  3. rs12820345[chr12:123320579]
Enhancers that have rs12820345[chr12:123320579]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123317054 123331955 enh15072
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas (Panc1) Heart
Transcript factors that have rs12820345[chr12:123320579]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123319802 123321550 POLR2A UCSC Txn Factor no Conserved 108066392
chr12 123320265 123321484 E2F1 UCSC Txn Factor no Conserved 108066393
chr12 123320523 123321073 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21580151
chr12 123320523 123321073 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108066394
chr12 123320561 123321071 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108066395
chr12 123320566 123320580 PLAG1 JASPAR yes 124296308
chr12 123320566 123320587 ZNF263 JASPAR yes 124296309
chr12 123320575 123320585 SP1 JASPAR yes 124296310
Genes associated with rs12820345[chr12:123320579], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 123319000 123347507 + HIP1R ENSG00000130787.9 123319000 0 Esophagus 0.101959 12654
chr12 123319000 123347507 + HIP1R ENSG00000130787.9 123319000 0 Spleen 0.11505 12654
chr12 123319000 123347507 + HIP1R ENSG00000130787.9 123319000 0 Thyroid 0.00836583 12654