EnhancerDB
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  3. rs12824563[chr12:57077828]
Enhancers that have rs12824563[chr12:57077828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 57068716 57080235 enh51223
Large Intestine Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (T-cell) Heart
chr12 57077806 57078249 vista13642
VISTA
Transcript factors that have rs12824563[chr12:57077828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 57077214 57078860 ZNF274 GTRD no Bone Marrow (K562) 108038628
chr12 57077373 57078245 ZNF143 GTRD no Epithelial (MCF-7) 108038629
chr12 57077415 57080468 ZNF274 GTRD no Bone Marrow (K562) 108038630
chr12 57077415 57080468 ZNF274 GTRD no Bone Marrow (K562) 108038631
chr12 57077423 57079463 ZNF143 GTRD no Epithelial (MCF-7) 108038632
chr12 57077423 57079463 ZNF143 GTRD no Epithelial (MCF-7) 108038633
chr12 57077483 57078155 ZNF143 GTRD no Epithelial (MCF-7) 108038634
chr12 57077492 57077954 ZNF143 GTRD no Epithelial (MCF-7) 108038635
chr12 57077495 57079805 ZNF274 GTRD no Bone Marrow (K562) 108038636
chr12 57077495 57079805 ZNF274 GTRD no Bone Marrow (K562) 108038637
chr12 57077497 57078050 ZNF143 GTRD no Epithelial (MCF-7) 108038638
chr12 57077499 57078115 ZNF143 GTRD no Epithelial (MCF-7) 108038639
chr12 57077523 57079458 ZNF143 GTRD no Epithelial (MCF-7) 108038640
chr12 57077523 57079458 ZNF143 GTRD no Epithelial (MCF-7) 108038641
chr12 57077541 57079777 ZNF143 GTRD no Epithelial (MCF-7) 108038642
chr12 57077541 57079777 ZNF143 GTRD no Epithelial (MCF-7) 108038643
chr12 57077555 57078135 ZNF143 GTRD no Epithelial (MCF-7) 108038644
chr12 57077558 57077978 ZNF143 GTRD no Epithelial (MCF-7) 108038645
chr12 57077598 57078087 ZNF143 GTRD no Epithelial (MCF-7) 108038646
chr12 57077608 57078167 ZNF143 GTRD no Epithelial (MCF-7) 108038647
chr12 57077628 57078013 ZNF143 GTRD no Epithelial (MCF-7) 108038648
chr12 57077629 57079436 ZBTB33 GTRD no Lung (A549) 108038649
chr12 57077629 57079436 ZBTB33 GTRD no Lung (A549) 108038650
chr12 57077640 57079345 ZNF274 GTRD no Liver (HepG2) 108038651
chr12 57077640 57079345 ZNF274 GTRD no Liver (HepG2) 108038652
chr12 57077664 57077896 ZNF143 GTRD no Epithelial (MCF-7) 108038653
chr12 57077672 57078034 ZNF143 GTRD no Epithelial (MCF-7) 108038654
chr12 57077688 57080158 ZNF274 GTRD no Bone Marrow (K562) 108038655
chr12 57077688 57080158 ZNF274 GTRD no Bone Marrow (K562) 108038656
chr12 57077701 57078140 ZNF143 GTRD no Epithelial (MCF-7) 108038657
chr12 57077714 57079072 TCF7L2 GTRD no Colon (HCT116) 21551168
chr12 57077714 57079072 TCF7L2 GTRD no Colon (HCT116) 108038658
chr12 57077725 57078315 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551169
chr12 57077725 57078315 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108038659
chr12 57077741 57079085 TCF7L2 GTRD no Colon (HCT116) 21551170
chr12 57077741 57079085 TCF7L2 GTRD no Colon (HCT116) 108038660
chr12 57077744 57079562 ZNF274 GTRD no Blood (GM12878) 21551171
chr12 57077744 57079562 ZNF274 GTRD no Blood (GM12878) 108038661
chr12 57077744 57079562 ZNF274 GTRD no Blood (GM12878) 108038662
chr12 57077770 57079755 ZNF274 GTRD no Cervix (HeLa-S3) 108038663
chr12 57077770 57079755 ZNF274 GTRD no Cervix (HeLa-S3) 108038664
chr12 57077802 57079253 ZNF274 GTRD no Liver (HepG2) 108038665
chr12 57077802 57079253 ZNF274 GTRD no Liver (HepG2) 108038666
chr12 57077805 57079037 TCF7L2 GTRD no Colon (HCT116) 21551172
chr12 57077805 57079037 TCF7L2 GTRD no Colon (HCT116) 108038667
chr12 57077818 57078098 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108038668
chr12 57077821 57077832 FOXH1 JASPAR yes 82415333
chr12 57077821 57077832 FOXH1 JASPAR yes 121107609
chr12 57077822 57079695 ZNF274 GTRD no Liver (HepG2) 108038669
chr12 57077822 57079695 ZNF274 GTRD no Liver (HepG2) 108038670
chr12 57077825 57078421 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551173
chr12 57077825 57078421 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108038671
Genes associated with rs12824563[chr12:57077828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More