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- rs12880192[chr14:55241130]
Enhancers that have rs12880192[chr14:55241130]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr14 |
55231095 |
55241575 |
enh15630 |
|
|
Transcript factors that have rs12880192[chr14:55241130]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr14
|
55240492
|
55241148
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108103305
|
|
|
chr14
|
55240758
|
55241215
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108103326
|
|
|
chr14
|
55240809
|
55241247
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108103346
|
|
|
chr14
|
55240833
|
55241277
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108103350
|
|
|
chr14
|
55240881
|
55241130
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
21619550
|
|
|
chr14
|
55240881
|
55241130
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108103351
|
|
|
chr14
|
55240889
|
55241152
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108103352
|
|
|
chr14
|
55240910
|
55241212
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108103353
|
|
|
chr14
|
55240947
|
55241155
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108103354
|
|
Genes associated with rs12880192[chr14:55241130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr14
|
55614830
|
55658396
|
-
|
DLGAP5
|
ENSG00000126787.8
|
55658396
|
373700
|
Stomach
|
0.00935309
|
13336
|
|