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- rs12943001[chr17:78238645]
Enhancers that have rs12943001[chr17:78238645]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
78238527 |
78238862 |
vista26320 |
|
|
Transcript factors that have rs12943001[chr17:78238645]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
78235971
|
78238710
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306537
|
|
|
chr17
|
78236295
|
78240927
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306538
|
|
|
chr17
|
78237761
|
78238820
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108306539
|
|
|
chr17
|
78237854
|
78240750
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108306540
|
|
|
chr17
|
78237862
|
78238763
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108306541
|
|
|
chr17
|
78237904
|
78240649
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306542
|
|
|
chr17
|
78238106
|
78238871
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108306544
|
|
|
chr17
|
78238130
|
78239740
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306545
|
|
|
chr17
|
78238207
|
78240840
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306546
|
|
|
chr17
|
78238336
|
78239453
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108306548
|
|
|
chr17
|
78238456
|
78238674
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108306551
|
|
|
chr17
|
78238629
|
78238648
|
CTCF
|
JASPAR
|
yes
|
|
21314294
|
|
|
chr17
|
78238638
|
78238657
|
REST
|
JASPAR
|
yes
|
|
21314295
|
|
|
chr17
|
78238641
|
78238645
|
NFE
|
TRANSFAC
|
yes
|
|
21314296
|
|
|
chr17
|
78238643
|
78238654
|
EBF1
|
JASPAR
|
yes
|
|
21314297
|
|
|
chr17
|
78238644
|
78238650
|
MZF1
|
JASPAR
|
yes
|
|
21314298
|
|
Genes associated with rs12943001[chr17:78238645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |