EnhancerDB
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  3. rs12949003[chr17:42609705]
Enhancers that have rs12949003[chr17:42609705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42605385 42616132 enh17182
Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Breast Uterus
Transcript factors that have rs12949003[chr17:42609705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42608322 42610375 ZNF274 GTRD no Cervix (HeLa-S3) 21762247
chr17 42608326 42610029 ZNF274 GTRD no Cervix (HeLa-S3) 21762248
chr17 42608335 42610600 ZNF274 GTRD no Cervix (HeLa-S3) 21762249
chr17 42608429 42610606 ZNF274 GTRD no Cervix (HeLa-S3) 21762250
chr17 42608453 42610307 ZNF274 GTRD no Cervix (HeLa-S3) 21762251
chr17 42608488 42610014 ZNF274 GTRD no Cervix (HeLa-S3) 21762252
chr17 42608585 42610336 ZNF274 GTRD no Cervix (HeLa-S3) 21762253
chr17 42608703 42610611 TCF7L2 GTRD no Colon (HCT116) 21762254
chr17 42608720 42610341 ZNF274 GTRD no Cervix (HeLa-S3) 21762255
chr17 42608722 42610365 TCF7L2 GTRD no Colon (HCT116) 21762256
chr17 42608723 42610367 TCF7L2 GTRD no Colon (HCT116) 21762257
chr17 42608724 42610439 TCF7L2 GTRD no Colon (HCT116) 21762258
chr17 42608742 42609960 ZNF274 GTRD no Cervix (HeLa-S3) 21762259
chr17 42608750 42610682 TCF7L2 GTRD no Colon (HCT116) 21762260
chr17 42608754 42610431 TCF7L2 GTRD no Colon (HCT116) 21762262
chr17 42608759 42609911 TCF7L2 GTRD no Colon (HCT116) 21762263
chr17 42608760 42610026 ZNF274 GTRD no Cervix (HeLa-S3) 21762264
chr17 42608792 42609960 ZNF274 GTRD no Cervix (HeLa-S3) 21762265
chr17 42608806 42610034 TCF7L2 GTRD no Colon (HCT116) 21762266
chr17 42608860 42609918 ZNF274 GTRD no Cervix (HeLa-S3) 21762267
chr17 42608894 42610113 ZNF274 GTRD no Cervix (HeLa-S3) 21762268
chr17 42608911 42610381 TCF7L2 GTRD no Colon (HCT116) 21762269
chr17 42608945 42610199 ZNF274 GTRD no Cervix (HeLa-S3) 21762270
chr17 42608996 42609944 TCF7L2 GTRD no Colon (HCT116) 21762272
chr17 42608999 42610074 ZNF274 GTRD no Cervix (HeLa-S3) 21762273
chr17 42609017 42610327 TCF7L2 GTRD no Colon (HCT116) 21762274
chr17 42609053 42609836 TCF7L2 GTRD no Colon (HCT116) 21762275
chr17 42609112 42610081 ZNF274 GTRD no Cervix (HeLa-S3) 21762277
chr17 42609148 42609927 TCF7L2 GTRD no Colon (HCT116) 21762278
chr17 42609188 42609882 ZNF274 GTRD no Cervix (HeLa-S3) 21762279
chr17 42609229 42610142 ZNF274 GTRD no Cervix (HeLa-S3) 21762280
chr17 42609356 42609727 TCF7L2 GTRD no Colon (HCT116) 21762281
Genes associated with rs12949003[chr17:42609705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More