EnhancerDB
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  3. rs12955862[chr18:57596176]
Enhancers that have rs12955862[chr18:57596176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57569615 57596800 enh4881
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs12955862[chr18:57596176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57596167 57596177 HOXC10 JASPAR yes 111066067
chr18 57596167 57596177 HOXD11 JASPAR yes 111066068
chr18 57596167 57596178 HOXC11 JASPAR yes 111066069
chr18 57596167 57596178 HOXD12 JASPAR yes 111066070
Genes associated with rs12955862[chr18:57596176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More