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- rs12959148[chr18:53421466]
Enhancers that have rs12959148[chr18:53421466]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
53418705 |
53423415 |
enh58825 |
|
|
Transcript factors that have rs12959148[chr18:53421466]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
53421236
|
53421500
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21823247
|
|
|
chr18
|
53421277
|
53421607
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21823248
|
|
|
chr18
|
53421456
|
53421470
|
GATA2
|
JASPAR
|
yes
|
|
110794664
|
|
|
chr18
|
53421458
|
53421466
|
GATA3
|
JASPAR
|
yes
|
|
110794665
|
|
|
chr18
|
53421458
|
53421466
|
GATA5
|
JASPAR
|
yes
|
|
110794666
|
|
Genes associated with rs12959148[chr18:53421466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |