EnhancerDB
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  3. rs12960040[chr18:55515224]
Enhancers that have rs12960040[chr18:55515224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55498005 55517815 enh17733
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs12960040[chr18:55515224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55515218 55515230 MEF2A JASPAR yes 110892734
chr18 55515219 55515229 MEF2A JASPAR yes 110892735
chr18 55515220 55515224 YY1 TRANSFAC yes 110892736
chr18 55515220 55515235 MEF2C JASPAR yes 110892737
chr18 55515222 55515237 FOXP1 JASPAR yes 110892738
chr18 55515223 55515238 FOXP1 JASPAR yes 110892739
chr18 55515224 55515230 TBP TRANSFAC yes 110892740
chr18 55515224 55515239 FOXP1 JASPAR yes 110892741
chr18 55515224 55515245 IRF1 JASPAR yes 110892742
Genes associated with rs12960040[chr18:55515224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More