EnhancerDB
  1. Home
  2. SNP
  3. rs12966493[chr18:55517038]
Enhancers that have rs12966493[chr18:55517038]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55498005 55517815 enh17733
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs12966493[chr18:55517038]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55516218 55517740 ZNF274 GTRD no Bone Marrow (K562) 21823725
chr18 55516531 55517565 ZNF274 GTRD no Bone Marrow (K562) 21823726
chr18 55516857 55517837 ZNF274 GTRD no Bone Marrow (K562) 21823727
chr18 55516865 55517506 ZNF274 GTRD no Bone Marrow (K562) 21823728
chr18 55516888 55517377 ZNF274 GTRD no Bone Marrow (K562) 21823729
chr18 55516924 55517588 ZNF274 GTRD no Bone Marrow (K562) 21823730
chr18 55516959 55517551 ZNF274 GTRD no Bone Marrow (K562) 21823731
chr18 55516965 55517326 ZNF274 GTRD no Bone Marrow (K562) 21823732
chr18 55516997 55517457 ZNF274 GTRD no Bone Marrow (K562) 21823733
chr18 55517001 55517425 ZNF274 GTRD no Bone Marrow (K562) 21823734
chr18 55517003 55517378 ZNF274 GTRD no Bone Marrow (K562) 21823735
chr18 55517019 55517573 ZNF274 GTRD no Bone Marrow (K562) 21823736
chr18 55517025 55517524 ZNF274 GTRD no Bone Marrow (K562) 21823737
chr18 55517027 55517039 POU2F1 JASPAR yes 110892961
chr18 55517027 55517040 POU3F3 JASPAR yes 110892962
chr18 55517027 55517041 POU1F1 JASPAR yes 110892963
chr18 55517028 55517039 FOXA1 JASPAR yes 110892964
chr18 55517028 55517040 POU3F1 JASPAR yes 110892965
chr18 55517028 55517040 POU3F2 JASPAR yes 110892966
chr18 55517028 55517041 POU2F2 JASPAR yes 110892967
chr18 55517028 55517043 FOXA1 JASPAR yes 110892968
chr18 55517029 55517038 POU3F4 JASPAR yes 110892970
chr18 55517029 55517038 POU5F1B JASPAR yes 110892971
Genes associated with rs12966493[chr18:55517038], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More