EnhancerDB
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  3. rs12970138[chr18:55680818]
Enhancers that have rs12970138[chr18:55680818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55677725 55693595 enh4867
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Epithelial (MCF-7)
Transcript factors that have rs12970138[chr18:55680818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55680592 55681216 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823974
chr18 55680629 55681199 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21823975
chr18 55680729 55681357 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823976
chr18 55680730 55681327 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823977
chr18 55680738 55681291 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823978
chr18 55680744 55681104 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823979
chr18 55680745 55681135 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823980
chr18 55680745 55681309 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823981
chr18 55680753 55681332 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823982
chr18 55680766 55681146 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823983
chr18 55680768 55681327 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823984
chr18 55680770 55681060 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823985
chr18 55680782 55681112 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823986
chr18 55680786 55681062 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823987
chr18 55680796 55681420 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823988
chr18 55680816 55680825 HIC2 JASPAR yes 110908113
Genes associated with rs12970138[chr18:55680818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More