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- rs12980469[chr19:3457058]
Enhancers that have rs12980469[chr19:3457058]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3455785 |
3462255 |
enh99535 |
|
|
Transcript factors that have rs12980469[chr19:3457058]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3455740
|
3460473
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367170
|
|
|
chr19
|
3455740
|
3460473
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367171
|
|
|
chr19
|
3456240
|
3458296
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367172
|
|
|
chr19
|
3456778
|
3460584
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367173
|
|
|
chr19
|
3456778
|
3460584
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367174
|
|
|
chr19
|
3456851
|
3459957
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367175
|
|
|
chr19
|
3456851
|
3459957
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367176
|
|
|
chr19
|
3456911
|
3460019
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367177
|
|
|
chr19
|
3456911
|
3460019
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367178
|
|
|
chr19
|
3456930
|
3458292
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367179
|
|
Genes associated with rs12980469[chr19:3457058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
3359561
|
3469215
|
+
|
NFIC
|
ENSG00000141905.13
|
3359561
|
0
|
Lung
|
0.00885012
|
16805
|
|