EnhancerDB
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  3. rs12984717[chr19:1868461]
Enhancers that have rs12984717[chr19:1868461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1850045 1876795 enh4955
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Pancreas Uterus Thymus
Transcript factors that have rs12984717[chr19:1868461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1866662 1869411 ZNF274 GTRD no Bone Marrow (K562) 21833037
chr19 1866809 1868594 ZNF274 GTRD no Bone Marrow (K562) 21833043
chr19 1867672 1869889 ZNF274 GTRD no Bone Marrow (K562) 21833069
chr19 1867866 1869030 ZNF274 GTRD no Bone Marrow (K562) 21833073
chr19 1868000 1868591 ZNF274 GTRD no Liver (HepG2) 21833076
chr19 1868050 1869521 ZNF274 GTRD no Bone Marrow (K562) 21833077
chr19 1868134 1868482 ZNF274 GTRD no Bone Marrow (K562) 21833078
chr19 1868134 1868621 ZNF274 GTRD no Bone Marrow (K562) 21833079
chr19 1868149 1869364 ZNF274 GTRD no Bone Marrow (K562) 21833081
chr19 1868216 1868616 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21833082
chr19 1868257 1868472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21833083
chr19 1868267 1868487 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21833084
chr19 1868275 1868462 ZNF274 GTRD no Bone Marrow (K562) 21833085
chr19 1868454 1868475 IRF1 JASPAR yes 112034830
chr19 1868457 1868478 IRF1 JASPAR yes 112034831
chr19 1868458 1868479 IRF1 JASPAR yes 112034832
chr19 1868459 1868474 FOXP1 JASPAR yes 112034833
chr19 1868459 1868480 IRF1 JASPAR yes 112034834
chr19 1868460 1868475 FOXP1 JASPAR yes 112034835
chr19 1868460 1868481 IRF1 JASPAR yes 112034836
chr19 1868461 1868476 FOXP1 JASPAR yes 112034837
chr19 1868461 1868482 IRF1 JASPAR yes 112034838
Genes associated with rs12984717[chr19:1868461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More