EnhancerDB
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  3. rs13404953[chr2:240304428]
Enhancers that have rs13404953[chr2:240304428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240296265 240307295 enh6225
Brain (SK-N-SH) Blood (T-cell) Muscle (A673) Thyroid Blood (Karpas-422) Neural Stem Cells (H9) Thymus
Transcript factors that have rs13404953[chr2:240304428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240304408 240304429 IRF1 JASPAR yes 82238581
chr2 240304412 240304433 IRF1 JASPAR yes 82238588
chr2 240304413 240304428 FOXP1 JASPAR yes 82238589
chr2 240304413 240304434 IRF1 JASPAR yes 82238590
chr2 240304414 240304429 PRDM1 JASPAR yes 82238591
chr2 240304414 240304435 IRF1 JASPAR yes 82238592
chr2 240304418 240304439 IRF1 JASPAR yes 82238593
chr2 240304419 240304434 FOXP1 JASPAR yes 82238594
chr2 240304421 240304436 FOXP1 JASPAR yes 82238595
chr2 240304423 240304438 FOXP1 JASPAR yes 82238596
chr2 240304424 240304439 FOXP1 JASPAR yes 82238597
chr2 240304427 240304442 MEF2C JASPAR yes 82238598
Genes associated with rs13404953[chr2:240304428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More