EnhancerDB
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  3. rs1342038[chr1:173301516]
Enhancers that have rs1342038[chr1:173301516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173296965 173304955 enh27251
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Adrenal Spleen Stomach
Transcript factors that have rs1342038[chr1:173301516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173300245 173303776 ZNF274 GTRD no Bone Marrow (K562) 21351120
chr1 173300748 173303858 ZNF274 GTRD no Bone Marrow (K562) 21351126
chr1 173301092 173303128 ZNF274 GTRD no Bone Marrow (K562) 21351127
chr1 173301110 173302991 ZNF274 GTRD no Bone Marrow (K562) 21351128
chr1 173301209 173301875 ZNF274 GTRD no Bone Marrow (K562) 21351129
chr1 173301220 173305423 ZNF274 GTRD no Bone Marrow (K562) 21351130
chr1 173301227 173302001 ZNF274 GTRD no Bone Marrow (K562) 21351131
chr1 173301249 173302007 ZNF274 GTRD no Bone Marrow (K562) 21351132
chr1 173301264 173302003 ZNF274 GTRD no Cervix (HeLa-S3) 21351133
chr1 173301287 173301987 ZNF274 GTRD no Bone Marrow (K562) 21351134
chr1 173301349 173301907 ZNF274 GTRD no Bone Marrow (K562) 21351135
chr1 173301372 173301849 ZNF274 GTRD no Bone Marrow (K562) 21351136
chr1 173301373 173302018 ZNF274 GTRD no Bone Marrow (K562) 21351137
chr1 173301396 173301888 ZNF274 GTRD no Bone Marrow (K562) 21351138
chr1 173301396 173301890 ZNF274 GTRD no Bone Marrow (K562) 21351139
chr1 173301472 173301870 ZNF274 GTRD no Bone Marrow (K562) 21351140
chr1 173301509 173301521 TAL1 JASPAR yes 33190841
chr1 173301510 173301522 NHLH1 JASPAR yes 33190842
chr1 173301511 173301521 FIGLA JASPAR yes 33190843
chr1 173301511 173301521 MSC JASPAR yes 33190844
chr1 173301511 173301521 TFAP4 JASPAR yes 33190845
chr1 173301511 173301523 TAL1 JASPAR yes 33190846
chr1 173301515 173301981 ZNF274 GTRD no Bone Marrow (K562) 21351141
Genes associated with rs1342038[chr1:173301516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 173009100 173020103 - TNFSF18 ENSG00000120337.7 173020103 281413 Heart 0.0336433 1575