EnhancerDB
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  3. rs138175089[chr1:28396573]
Enhancers that have rs138175089[chr1:28396573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs138175089[chr1:28396573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28396562 28396583 IRF1 JASPAR yes 27736876
chr1 28396566 28396580 STAT1 JASPAR yes 27736877
chr1 28396566 28396581 PRDM1 JASPAR yes 27736878
chr1 28396566 28396584 IRF2 JASPAR yes 27736879
chr1 28396567 28396579 IRF1 JASPAR yes 27736880
chr1 28396573 28396591 NR3C1 JASPAR yes 27736881
Genes associated with rs138175089[chr1:28396573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More