EnhancerDB
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  3. rs138323825[chr1:222130397]
Enhancers that have rs138323825[chr1:222130397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 222129374 222148777 enh27556
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs138323825[chr1:222130397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222130262 222130860 SOX2 GTRD no Neural Stem Cells (H9) 21383020
chr1 222130276 222130654 SOX2 GTRD no Neural Stem Cells (H9) 21383021
Genes associated with rs138323825[chr1:222130397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More