EnhancerDB
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  3. rs138377825[chr1:8090559]
Enhancers that have rs138377825[chr1:8090559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8089365 8111955 enh11459
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs138377825[chr1:8090559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8088588 8098693 TCF7L2 GTRD no Colon (HCT116) 21325212
chr1 8090546 8090566 PPARG JASPAR yes 26501459
chr1 8090547 8090565 NR3C1 JASPAR yes 26501460
chr1 8090549 8090564 ESR2 JASPAR yes 26501461
chr1 8090549 8090569 ESR1 JASPAR yes 26501462
Genes associated with rs138377825[chr1:8090559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More