EnhancerDB
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  3. rs138406353[chr18:55252046]
Enhancers that have rs138406353[chr18:55252046]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55248585 55252735 enh109810
Stomach
Transcript factors that have rs138406353[chr18:55252046]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55248232 55253738 ZNF274 GTRD no Blood (GM12878) 108337788
chr18 55248232 55253738 ZNF274 GTRD no Blood (GM12878) 108337789
chr18 55248953 55252783 ZNF274 GTRD no Blood (GM12878) 108337808
chr18 55248957 55253681 ZNF274 GTRD no Blood (GM12878) 108337809
chr18 55248987 55252110 ZNF274 GTRD no Blood (GM12878) 108337811
chr18 55249197 55252091 ZNF274 GTRD no Blood (GM12878) 108337812
chr18 55249363 55252734 ZBTB33 GTRD no Brain (SK-N-SH) 108337813
chr18 55249427 55252619 ZBTB33 GTRD no Brain (SK-N-SH) 108337814
chr18 55250087 55252540 ZBTB33 GTRD no Brain (SK-N-SH) 108337815
chr18 55250218 55252561 ZBTB33 GTRD no Brain (SK-N-SH) 108337816
chr18 55250391 55252157 ZBTB33 GTRD no Brain (SK-N-SH) 108337823
chr18 55250392 55252478 ZBTB33 GTRD no Brain (SK-N-SH) 108337824
chr18 55250403 55252442 ZBTB33 GTRD no Brain (SK-N-SH) 108337829
chr18 55250497 55252116 ZBTB33 GTRD no Brain (SK-N-SH) 108337850
chr18 55252030 55252046 SOX4 JASPAR yes 110873540
chr18 55252038 55252053 FOXP1 JASPAR yes 110873541
chr18 55252039 55252048 SRY JASPAR yes 110873542
Genes associated with rs138406353[chr18:55252046], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More