EnhancerDB
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  3. rs138409902[chr1:117044260]
Enhancers that have rs138409902[chr1:117044260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138409902[chr1:117044260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117043805 117045046 ZNF274 GTRD no Bone Marrow (K562) 21333159
chr1 117043815 117044271 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333160
chr1 117044045 117044712 ZNF274 GTRD no Bone Marrow (K562) 21333162
chr1 117044066 117044552 ZNF274 GTRD no Bone Marrow (K562) 21333163
chr1 117044103 117044658 ZNF274 GTRD no Bone Marrow (K562) 21333164
chr1 117044104 117044414 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333165
chr1 117044152 117044428 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333166
chr1 117044157 117044521 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333167
chr1 117044176 117044486 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333168
chr1 117044182 117044572 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333169
chr1 117044185 117044489 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333170
chr1 117044238 117044545 ZNF274 GTRD no Bone Marrow (K562) 21333171
chr1 117044248 117044637 ZNF274 GTRD no Bone Marrow (K562) 21333172
chr1 117044248 117044660 ZNF274 GTRD no Bone Marrow (K562) 21333173
chr1 117044260 117044266 NFIC JASPAR yes 31814583
Genes associated with rs138409902[chr1:117044260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More