EnhancerDB
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  3. rs138447220[chr12:54151271]
Enhancers that have rs138447220[chr12:54151271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54135485 54153565 enh2372
Cervix (HeLa-S3) Ovary Blood (GM12878) Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Pancreas (Panc1) Uterus
Transcript factors that have rs138447220[chr12:54151271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54150705 54151355 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549601
chr12 54150705 54151355 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036568
chr12 54150820 54151296 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549604
chr12 54150820 54151296 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036572
chr12 54150878 54151398 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549605
chr12 54150878 54151398 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036575
chr12 54150921 54151538 CTCF UCSC Txn Factor no Conserved 108036579
chr12 54150929 54151313 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549608
chr12 54150929 54151313 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036581
chr12 54150943 54151593 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549611
chr12 54150943 54151593 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036585
chr12 54150976 54151301 ZNF143 UCSC Txn Factor no Conserved 108036591
chr12 54150988 54151278 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036593
chr12 54151010 54151274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21549618
chr12 54151010 54151274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036598
chr12 54151011 54151301 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549619
chr12 54151011 54151301 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036599
chr12 54151258 54151279 REST JASPAR yes 121005226
chr12 54151269 54151280 TBX20 JASPAR yes 121005227
Genes associated with rs138447220[chr12:54151271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More