EnhancerDB
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  3. rs138490297[chr2:29331293]
Enhancers that have rs138490297[chr2:29331293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 29326250 29340371 enh18402
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
chr2 29331222 29331429 vista30871
VISTA
Transcript factors that have rs138490297[chr2:29331293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 29331136 29331484 CEBPB UCSC Txn Factor no Conserved 108431663
chr2 29331280 29331299 REST JASPAR yes 22026808
chr2 29331280 29331299 REST JASPAR yes 72688760
chr2 29331282 29331299 PAX1 JASPAR yes 22026809
chr2 29331282 29331299 PAX9 JASPAR yes 22026810
chr2 29331282 29331299 PAX1 JASPAR yes 72688761
chr2 29331282 29331299 PAX9 JASPAR yes 72688762
chr2 29331289 29331294 SP1 TRANSFAC yes 22026811
chr2 29331289 29331294 SP1 TRANSFAC yes 72688763
chr2 29331289 29331309 TP63 JASPAR yes 22026812
chr2 29331289 29331309 TP63 JASPAR yes 72688764
chr2 29331290 29331295 SP1 TRANSFAC yes 22026813
chr2 29331290 29331295 SP1 TRANSFAC yes 72688765
chr2 29331292 29331302 SP1 JASPAR yes 22026814
chr2 29331292 29331302 SP1 JASPAR yes 72688766
Genes associated with rs138490297[chr2:29331293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More