EnhancerDB
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  3. rs138500480[chr12:52558623]
Enhancers that have rs138500480[chr12:52558623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs138500480[chr12:52558623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52558183 52558839 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546570
chr12 52558385 52558849 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546571
chr12 52558386 52558762 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546572
chr12 52558496 52559258 ZNF143 GTRD no Epithelial (MCF-7) 21546573
chr12 52558613 52558628 FOXP1 JASPAR yes 120924261
chr12 52558614 52558625 FOXP2 JASPAR yes 120924262
chr12 52558615 52558623 FOXD1 JASPAR yes 120924263
chr12 52558615 52558623 FOXO3 JASPAR yes 120924264
chr12 52558616 52558623 FOXD2 JASPAR yes 120924265
chr12 52558616 52558623 FOXI1 JASPAR yes 120924266
chr12 52558616 52558623 FOXL1 JASPAR yes 120924267
chr12 52558616 52558623 FOXO4 JASPAR yes 120924268
chr12 52558616 52558623 FOXO6 JASPAR yes 120924269
chr12 52558616 52558623 FOXP3 JASPAR yes 120924270
chr12 52558616 52558624 FOXO3 JASPAR yes 120924271
chr12 52558617 52558636 CTCF JASPAR yes 120924272
Genes associated with rs138500480[chr12:52558623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More