EnhancerDB
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  3. rs138542459[chr17:75871409]
Enhancers that have rs138542459[chr17:75871409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75857325 75875375 enh4619
Bone Marrow (K562) Brain (SK-N-SH) Blood (T-cell) Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus Heart
chr17 75871159 75871457 vista26150
VISTA
Transcript factors that have rs138542459[chr17:75871409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75869524 75879436 TCF7L2 GTRD no Colon (HCT116) 108300497
chr17 75869524 75879436 TCF7L2 GTRD no Colon (HCT116) 108300498
chr17 75870905 75871702 TCF7L2 GTRD no Colon (HCT116) 108300499
chr17 75871194 75871450 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21791601
chr17 75871194 75871450 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108300500
chr17 75871213 75872321 TCF7L2 GTRD no Colon (HCT116) 108300501
chr17 75871213 75872321 TCF7L2 GTRD no Colon (HCT116) 108300502
chr17 75871405 75874599 TCF7L2 GTRD no Colon (HCT116) 108300503
chr17 75871405 75874599 TCF7L2 GTRD no Colon (HCT116) 108300504
Genes associated with rs138542459[chr17:75871409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More